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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs2187723 chr22:37422390 C/G 6.3E-7 509 37.03 39.62 6.18 KM Plot
KIRC rs220305 chr21:43511179 A/G 3.89E-5 509 35.27 45.95 28.43 KM Plot
KIRC rs2237228 chr6:26104630 C/T 1.6E-8 496 37.73 36.28 3.37 KM Plot
KIRC rs223962 chr4:12929639 A/T 3.67E-5 504 37.18 37.67 3.53 KM Plot
KIRC rs224000 chr4:12935302 C/A 3.1E-5 503 36.97 43.95 3.53 KM Plot
KIRC rs2255089 chr1:111773568 C/G 5.9E-5 509 38.1 37.67 33.97 KM Plot
KIRC rs2289817 chr15:22960700 A/G 0.000112 496 37.73 37.77 24.07 KM Plot
KIRC rs2293736 chr16:15841830 C/T 4.18E-6 509 37.35 37.93 3.67 KM Plot
KIRC rs2298116 chr1:110536203 C/T 2.08E-7 509 3.37 25.43 38.05 KM Plot
KIRC rs2298694 chr21:47650362 C/T 2.73E-11 501 37.25 39.52 7.4 KM Plot
KIRC rs2304803 chr10:90661698 A/G 5.07E-5 490 37.67 33.07 40.1 KM Plot
KIRC rs2319234 chr4:68331984 C/T 3.84E-5 508 18.4 42.62 37.33 KM Plot
KIRC rs2334550 chr11:1512132 G/A 8.53E-5 507 5.47 37.37 37.33 KM Plot
KIRC rs2334555 chr11:1509007 T/C 8.3E-5 509 5.47 37.6 37.18 KM Plot
KIRC rs2334556 chr11:1508432 A/G 8.3E-5 509 5.47 37.6 37.18 KM Plot